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@digitalcytometry

digitalcytometry

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  1. ecotyper ecotyper Public

    EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.

    R 247 46

  2. cytospace cytospace Public

    CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data

    Python 151 21

  3. cytotrace2 cytotrace2 Public

    CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

    R 265 25

  4. spatialecotyper spatialecotyper Public

    Deciphering spatial ecotypes from spatial, single-cell, and bulk transcriptomic data

    R 46 4

Repositories

Showing 4 of 4 repositories
  • spatialecotyper Public

    Deciphering spatial ecotypes from spatial, single-cell, and bulk transcriptomic data

    digitalcytometry/spatialecotyper's past year of commit activity
    R 46 4 1 0 Updated Aug 26, 2026
  • cytotrace2 Public

    CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

    digitalcytometry/cytotrace2's past year of commit activity
    R 265 25 1 0 Updated Jul 8, 2026
  • ecotyper Public

    EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.

    digitalcytometry/ecotyper's past year of commit activity
    R 247 46 13 0 Updated May 11, 2026
  • cytospace Public

    CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data

    digitalcytometry/cytospace's past year of commit activity
    Python 151 21 11 0 Updated Feb 20, 2025

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