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EBISPOT

EMBL-EBI Samples, Phenotypes, and Ontologies Team

68 followers
https://www.ebi.ac.uk/spot/

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efo efo Public

The Experimental Factor Ontology (EFO)

Python 64 15
ols4 ols4 Public

The EMBL-EBI Ontology Lookup Service (OLS)

Java 103 47
zooma2 zooma2 Public

Java 2
oxo2 oxo2 Public

A SSSOM compliant implementation of OxO that is backwards compatible with OxO version 1

Java 2

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Showing 10 of 72 repositories

GrEBI Public
HPC aggregation pipeline and API/MCP server for LLM-mediated biomedical data integration

EBISPOT/GrEBI's past year of commit activity

Jupyter Notebook 4 Apache-2.0 4 11 (1 issue needs help) 1 Updated Sep 18, 2026
ols4 Public
The EMBL-EBI Ontology Lookup Service (OLS)

EBISPOT/ols4's past year of commit activity

Java 103 Apache-2.0 47 37 14 Updated Sep 17, 2026
efo Public
The Experimental Factor Ontology (EFO)

EBISPOT/efo's past year of commit activity

Python 64 15 152 (2 issues need help) 10 Updated Sep 15, 2026
oxo2 Public
A SSSOM compliant implementation of OxO that is backwards compatible with OxO version 1

EBISPOT/oxo2's past year of commit activity

Java 2 Apache-2.0 0 2 5 Updated Sep 15, 2026
zooma2 Public

EBISPOT/zooma2's past year of commit activity

Java 2 Apache-2.0 0 3 2 Updated Sep 13, 2026
environmental-exposure-ontology Public Forked from EnvironmentOntology/environmental-exposure-ontology
Modular environmental exposures ontology

EBISPOT/environmental-exposure-ontology's past year of commit activity

Makefile 0 22 0 0 Updated Sep 10, 2026
owlmake Public

EBISPOT/owlmake's past year of commit activity

Rust 0 Apache-2.0 0 0 0 Updated Sep 4, 2026
hermit-rs Public Forked from phillord/hermit-reasoner

EBISPOT/hermit-rs's past year of commit activity

Rust 1 27 0 0 Updated Sep 3, 2026
horned-owl Public Forked from phillord/horned-owl

EBISPOT/horned-owl's past year of commit activity

Rust 0 LGPL-3.0 21 0 0 Updated Sep 1, 2026
cohort-ontology Public
A lightweight ontology for consistent identification and description of human cohorts. It defines a unique cohort identifier with minimal metadata, enabling linkage, discovery, and integration of cohort-related data while supporting both named and implicitly defined cohorts.

EBISPOT/cohort-ontology's past year of commit activity

Makefile 5 CC0-1.0 0 4 0 Updated Aug 26, 2026

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obofoundry ontology mcp ontologies owl

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